Title of article :
Chaste: A test-driven approach to software development for biological modelling Original Research Article
Author/Authors :
Joe Pitt-Francis، نويسنده , , Pras Pathmanathan، نويسنده , , Miguel O. Bernabeu، نويسنده , , Rafel Bordas، نويسنده , , Jonathan Cooper، نويسنده , , Alexander G. Fletcher، نويسنده , , Gary R. Mirams، نويسنده , , Philip Murray، نويسنده , , James M. Osborne، نويسنده , , Alex Walter، نويسنده , , S. Jon Chapman، نويسنده , , Alan Garny، نويسنده , , Ingeborg M.M. van Leeuwen، نويسنده , , PHILIP K. MAINI، نويسنده , , Blanca Rod، نويسنده ,
Issue Information :
ماهنامه با شماره پیاپی سال 2009
Pages :
20
From page :
2452
To page :
2471
Abstract :
Chaste (‘Cancer, heart and soft-tissue environment’) is a software library and a set of test suites for computational simulations in the domain of biology. Current functionality has arisen from modelling in the fields of cancer, cardiac physiology and soft-tissue mechanics. It is released under the LGPL 2.1 licence. Chaste has been developed using agile programming methods. The project began in 2005 when it was reasoned that the modelling of a variety of physiological phenomena required both a generic mathematical modelling framework, and a generic computational/simulation framework. The Chaste project evolved from the Integrative Biology (IB) e-Science Project, an inter-institutional project aimed at developing a suitable IT infrastructure to support physiome-level computational modelling, with a primary focus on cardiac and cancer modelling.
Keywords :
Cardiac electrophysiology , Intestinal crypt simulation
Journal title :
Computer Physics Communications
Serial Year :
2009
Journal title :
Computer Physics Communications
Record number :
1137820
Link To Document :
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