• Title of article

    GROW: A gradient-based optimization workflow for the automated development of molecular models Original Research Article

  • Author/Authors

    Marco Hülsmann، نويسنده , , Thorsten K?ddermann، نويسنده , , Jadran Vrabec، نويسنده , , Dirk Reith، نويسنده ,

  • Issue Information
    ماهنامه با شماره پیاپی سال 2010
  • Pages
    15
  • From page
    499
  • To page
    513
  • Abstract
    The concept, issues of implementation and file formats of the GRadient-based Optimization Workflow for the Automated Development of Molecular Models ‘GROW’ (version 1.0) software tool are described. It enables users to perform automated optimizations of force field parameters for atomistic molecular simulations by an iterative, gradient-based optimization workflow. The modularly constructed tool consists of a main control script, specific implementations and secondary control scripts for each numerical algorithm, as well as analysis scripts. Taken together, this machinery is able to automatically optimize force fields and it is extensible by developers with regard to further optimization algorithms and simulation tools. Results on nitrogen are briefly reported as a proof of concept.
  • Keywords
    Molecular simulation , Numerical optimization , Gradient-based algorithms , Phase change properties , Atomistic models , Force field design
  • Journal title
    Computer Physics Communications
  • Serial Year
    2010
  • Journal title
    Computer Physics Communications
  • Record number

    1137889