Title of article :
A transition state analog for phosphate diester cleavage catalyzed by a small enzyme-like metal ion complex
Author/Authors :
Yang، نويسنده , , Meng-Yin and Morrow، نويسنده , , Janet R. and Richard، نويسنده , , John P.، نويسنده ,
Issue Information :
روزنامه با شماره پیاپی سال 2007
Abstract :
The values of Ki for methylphosphate dianion (MP2−) inhibition of the cleavage of 2-hydroxypropyl-4-nitrophenyl phosphate (HpPNP) catalyzed by 1,3-bis(1,4,7-triazacyclonon-1-yl)-2-hydroxypropane (Zn2(1)(H2O)) approach a small limiting value of 6 μM at pH < pKa = 7.8 for deprotonation of the catalyst to form Zn2(1)(HO−). There is a 1600-fold difference in the affinity of a phosphate diester monoanion (diethylphosphate) and phosphate monester dianion (MP2−) for Zn2(1)(H2O). This suggests that the latter is an analog for the transition state dianion for the cleavage reaction of HpPNP and other phosphate diesters. The observation that this transition state analog binds selectively to Zn2(1)(H2O) provides strong evidence that this is the active form of the catalyst which binds selectively to the ionized substrate. The efficiency of catalysis of the cleavage of phosphate diesters by Zn2(1)(H2O) and proteins is compared.
Keywords :
metal ion catalysis , Phosphate diester , RNA analog
Journal title :
Bioorganic Chemistry: an International Journal
Journal title :
Bioorganic Chemistry: an International Journal