Title of article :
Transcriptome analysis of an oil-rich race A strain of Botryococcus braunii (BOT-88-2) by de novo assembly of pyrosequencing cDNA reads
Author/Authors :
Baba، نويسنده , , Masato and Ioki، نويسنده , , Motohide and Nakajima، نويسنده , , Nobuyoshi and Shiraiwa، نويسنده , , Yoshihiro and Watanabe، نويسنده , , Makoto M.، نويسنده ,
Issue Information :
روزنامه با شماره پیاپی سال 2012
Abstract :
To gain genetic information of oil-producing algae Botryococcus braunii, a novel dataset of 185,936 complementary DNA (cDNA) reads was obtained via pyrosequencing for the representative race A strain (strain BOT-88-2) exhibiting high oil productivity. The cDNA reads were assembled to retrieve 29,038 non-redundant sequences and 964 of them were successfully annotated based on similarity to database sequences. The transcriptome data embraced candidate genes for majority of enzymes involved in the biosynthesis of unsaturated very long-chain fatty acids. The transcriptome dataset has been deposited in the GenBank/EMBL/DDBJ database.
Keywords :
Expressed sequence tag (EST) , Hydrocarbon , 454 Pyrosequencing , Very long-chain fatty acid , transcriptome
Journal title :
Bioresource Technology
Journal title :
Bioresource Technology