Title of article :
A study of rumen microbial community of Baluchi lambs fed a high concentrate diet containing conventional ingredients
Author/Authors :
Ebrahimi, Hadi Department of Animal Science - Faculty of Agriculture - Ferdowsi University of Mashhad - Mashhad, Iran , Valizadeh, Reza Department of Animal Science - Faculty of Agriculture - Ferdowsi University of Mashhad - Mashhad, Iran , Heidarian Miri, Vahideh Department of Animal Science - Faculty of Agriculture - Ferdowsi University of Mashhad - Mashhad, Iran , Janssen, Peter H. AgResearch Limited - Grasslands Research Centre - Palmerston North 4442, New Zealand
Abstract :
Baluchi sheep is the dominant fat-tail breed in Iran. We studied the microbial
communities in the rumen of four Baluchi lambs fed a high concentrate conventional diet.
Using DNA extracted from the rumen samples, we found the partial ribosomal rRNA of
bacterial and archaeal were amplified by polymerase chain reaction (PCR). The amplicons
were sequenced using 454 Titanium pyrosequencing and the data analyzed using the
QIIME software package. The results indicated that Prevotella, a member of thephylum
Bacteroidetes, dominated and its relative abundance accounted for 70.7 ± 2.68 % of
the bacteria. Firmicutes was the second most abundant phylum, and Selenomonas and
unclassified Veillonellaceae and Lachnospiraceae were present at relative abundances of
2.4 ± 0.62, 2.1 ± 0.21 and 1.9 ± 0.58 %, respectively. Entodiniumwas the most abundant
genus of protozoa, comprising 61.6 ± 4.52 % of the protozoal community, followed by
Polyplastron and Isotricha with relative abundances of 18.2 ± 2.35 and 9.7 ± 5.62 %,
respectively. More than half of the archaeal community (53.3 ± 1.87 %) was composed
of members of the Methanobrevibacter gottschalkiiclade. The second and third most
dominant archaea were members of the order Methanomassiliicoccales (28.3 ± 5.23 %) and
Methanobrevibacter wolinii and relatives (8.5 ± 4.26 %). Based on this, rumen microbes of
Baluchi lambs fed a total-mixed rations diet were similar to rumen microbes of ruminants
fed similar diets in the other geographic regions around the world.
Keywords :
Pyrosequencing , High Concentrate Diet , Rumen Microbes , Baluchi Lamb
Journal title :
Astroparticle Physics