Title of article :
Protein Interaction Mapping Related to to Becker Muscular Dystrophy
Author/Authors :
Peyvandi, Ali Azghar Hearing Disorders Research Center - Shahid Beheshti University of Medical Sciences, Tehran , Okhovatian, Farshad Physiotherapy Research Centre - School of Rehabilitation - Shahid Beheshti University of Medical Sciences, Tehran , Rezaei Tavirani, Majid Faculty of Medicine - Iran University of Medical Sciences, Tehran , Zamanian Azodi, Mona Proteomics Research Center - Shahid Beheshti University of Medical Sciences, Tehran , Rezaei Tavirani, Mostafa Proteomics Research Center - Faculty of Paramedical Sciences - Shahid Beheshti University of Medical Sciences, Tehran
Abstract :
Objective
Becker Muscular Dystrophy (BMD) is a neuromuscular disorder
which is incurable. In this research protein interaction network of
most associated proteins with BMD to provide better clarification of
disorder underlying mechanism was investigated.
Materials & Methods
The related genes to BMD were retrieved via string database and
conducted by Cytoscape and the related algorithms. The network
centrality analysis was performed based on degree, betweenness,
closeness, and stress parameters. Gene ontology and clustering were
performed via ClueGO analysis. Results
DMD as the super-hub as well as other central proteins including
UTRN, TTN, DNM2, and RYR1 are important in BMD in terms of
interactive features. The impairment of muscular contraction may be
vital in BMD disease pathogenesis as it is the highlighted biological
process term obtained by ClueGO analysis.
Conclusion
DMD targeting may be the main concern for dystrophy clinical
approaches. However, the other suggested proteins should be
evaluated. Targeting these key proteins are required for treatment
goals following extensive validation studies.
Keywords :
Becker muscular dystrophy (BMD) , Protein-protein interaction , Map analysis , Gene ontology , Hub proteins
Journal title :
Astroparticle Physics