Title of article :
Identification of the Key Genes Involved in the Effect of Folic Acid on Endothelial Progenitor Cell Transcriptome of Patients with Type 1 Diabetes
Author/Authors :
Lu, Yi Department of Cardiology - Minhang Hospital - Fudan University - Xin-Song Road - Shanghai, China , Yang, Qianhong Department of Geriatrics - Minhang Hospital - Fudan University - Xin-Song Road - Shanghai, China , Hu, Wei Department of Cardiology - Minhang Hospital - Fudan University - Xin-Song Road - Shanghai, China , Dong, Jian Department of Cardiology - Minhang Hospital - Fudan University - Xin-Song Road - Shanghai, China
Abstract :
Type 1 diabetes (T1D) is one of the most common autoimmune diseases in children. Previous studies have suggested that
endothelial progenitor cells (EPCs) might be engaged in the regulating of the biological processes in T1D and folic acid (FA)
might be engaged in regulating EPC function. The present study has identified 716 downregulated genes and 617 upregulated
genes in T1D EPC cases after treated with FA. Bioinformatics analysis has shown that these DEGs were engaged in regulating
metabolic processes, cell proliferation-related processes, bone marrow development, cell adhesion, platelet degranulation, and
cellular response to growth factor stimulus. Furthermore, we have conducted and identified hub PPI networks. Importantly, we
have identified 6 upregulated genes (POLR2A, BDNF, CDC27, LTN1, RAB1A, and CUL2) and 8 downregulated genes (SHC1,
GRIN2B, TTN, GNAL, GNB2, PTK2, TF, and TLR9) as key regulators involved in the effect of FA on endothelial progenitor
cell transcriptome of patients with T1D. We think that this study could provide novel information to understand the roles of FA
in regulating EPCs of T1D patients.
Keywords :
Type 1 , Folic Acid , Transcriptome , T1D
Journal title :
Computational and Mathematical Methods in Medicine