Title of article :
Immune Infiltration Pattern Associated with Diagnosis and Development in Benign Prostatic Hyperplasia
Author/Authors :
xu, xianglai fudan university - zhongshan hospital - department of urology, Shanghai, China , wang, ying fudan university - zhongshan hospital - department of critical care medicine, Shanghai, China , sihong, zhang fudan university - zhongshan hospital - department of urology, Shanghai, China , lu, jidong fudan university - zhongshan hospital - department of urology, Shanghai, China , zheng, xiaoyu fudan university - zhongshan hospital - department of urology, Shanghai, China , wang, jiajun fudan university - zhongshan hospital - department of urology, Shanghai, China , zhu, yanjun fudan university - zhongshan hospital - department of urology, Shanghai, China , guo, jianming fudan university - zhongshan hospital - department of urology, Shanghai, China
From page :
564
To page :
572
Abstract :
Purpose: Benign prostatic hyperplasia (BPH) significantly reduces the quality of life. However, the biological mechanisms of BPH development remain largely unknown. We aimed to investigate the essential genomic and immunogenic features in BPH. Materials and Methods: Transcriptome profiling and clinical data of BPH and normal prostate samples were acquired from GEO datasets. The discovery sets were composed of GSE119195, GSE7307, GSE101486, while the validation set was GSE132714. ESTIMATE and CIBERSORT were used to investigate the immunogenic features. Furthermore, transcriptional and weighted gene co-expression network analysis (WGCNA) was used for further analysis. Results: BPH samples presented a higher immune score. Meanwhile, CIBERSORT deconvolution revealed that BPH exists significantly abundant M2 Macrophages, follicular T helper cells, resting mast cells, and fewer plasma cells, activated CD4+ memory T cells, and activated mast cells. WGCNA analysis also revealed significantly enriched immune-related modules in BPH. Transcriptomic analysis identified SOCS3, IL6, C3, IGF1, NOTCH1, and VCAN as key regulators of immunogenic phenotype in BPH. Moreover, we generated an immunological gene signature for BPH, which worked well in the validation cohort. Conclusion: In our study, BPH samples exhibited a distinct immune infiltration pattern, represented by an immunological gene signature. This genomic-based assessment model reveals the potential transcriptomic patterns during BPH development.
Keywords :
benign prostatic hyperplasia , transcriptomics , immune cell infiltration , diagnostic biomarker
Journal title :
Urology Journal
Journal title :
Urology Journal
Record number :
2749600
Link To Document :
بازگشت