Properties of light absorption in a highly coloured estuarine system in south-east Australia which is prone to blooms of the toxic dinoflagellate Gymnodinium catenatum

The Huon Estuary in south-east Tasmania is an important site in Australia’s aquaculture and finfish industries. Atlantic salmon and shellfish are farmed in the Huon River Estuary, which drains a catchment that includes both areas of pristine wilderness and agriculture. The estuary experiences algal blooms, including blooms of the toxic dinoflagellate Gymnodinium catenatum, which can cause considerable problems for the aquaculture industry. The freshwater input is highly coloured due to high levels of humic material and this combined with intrusions of clearer oceanic water and the occurrence of algal blooms makes this estuary optically complex. Between November 1996 and September 1998 samples for pigment and optical analyses were collected weekly from five sites within the mid to lower regions of the estuary. In addition, every three months (beginning July 1996), samples were collected from 30 sites within the full river/estuary system. Early in December 1997 a bloom of Gymnodinium catenatum occurred throughout the estuary and persisted until June 1998. Chromophoric dissolved organic matter (CDOM) was found to dominate the total absorption of the water throughout the entire estuary and over the two-year duration of the study. The occurrence of algal blooms showed no correlation with the optical characteristics of the estuary, suggesting that optical parameters cannot be used to predict the occurrence of algal blooms in this estuary. Blooms of different algal species, such as diatoms and dinoflagellates, may be able to be distinguished by their absorption spectra in the UV region rather than the visible region. To date, this study is the most detailed spatial and temporal study of the characteristics of light absorption in an estuarine system within Australia.