• DocumentCode
    1041715
  • Title

    From Genes to Organisms Via the Cell: A Problem-Solving Environment for Multicellular Development

  • Author

    Cickovski, Trevor ; Aras, Kedar ; Swat, Maciej ; Merks, Roeland M.H. ; Glimm, Tilmann ; Hentschel, H.George E. ; Alber, Mark S. ; Glazier, James A. ; Newman, Stuart A. ; Izaguirre, Jesus A.

  • Author_Institution
    University of Notre Dame
  • Volume
    9
  • Issue
    4
  • fYear
    2007
  • Firstpage
    50
  • Lastpage
    60
  • Abstract
    To gain performance, developers often build scientific applications in procedural languages, such as C or Fortran, which unfortunately reduces flexibility. To address this imbalance, the authors present CompuCell3D, a multitiered, flexible, and scalable problem-solving environment for morphogenesis simulations that´s written in C++ using object-oriented design patterns.
  • Keywords
    Bioinformatics; Biological information theory; Biological system modeling; Cells (biology); Genomics; Graphical user interfaces; Object oriented modeling; Organisms; Problem-solving; Visualization; computer applications; modeling; simulation; software engineering;
  • fLanguage
    English
  • Journal_Title
    Computing in Science & Engineering
  • Publisher
    ieee
  • ISSN
    1521-9615
  • Type

    jour

  • DOI
    10.1109/MCSE.2007.74
  • Filename
    4263265
    • Link To Document
    https://search.isc.ac/dl/search/defaultta.aspx?DTC=49&DC=1041715