DocumentCode
1132397
Title
On the Performance of an Implicit–Explicit Runge--Kutta Method in Models of Cardiac Electrical Activity
Author
Spiteri, Raymond J. ; Dean, Ryan C.
Author_Institution
Univ. of Saskatchewan, Saskatoon
Volume
55
Issue
5
fYear
2008
fDate
5/1/2008 12:00:00 AM
Firstpage
1488
Lastpage
1495
Abstract
Mathematicalmodels of electric activity in cardiac tissue are becoming increasingly powerful tools in the study of cardiac arrhythmias. Considered here are mathematical models based on ordinary differential equations (ODEs) that describe the ionic currents at the myocardial cell level. Generating an efficient numerical solution of these ODEs is a challenging task, and, in fact, the physiological accuracy of tissue-scale models is often limited by the efficiency of the numerical solution process. In this paper, we examine the efficiency of the numerical solution of four cardiac electrophysiological models using implicit-explicit Runge-Kutta (IMEX-RK) splitting methods. We find that variable step-size implementations of IMEX-RK methods (ARK3 and ARK5) that take advantage of Jacobian structure clearly outperform the methods commonly used in practice.
Keywords
Runge-Kutta methods; bioelectric potentials; biological tissues; cellular biophysics; differential equations; electrocardiography; physiological models; Jacobian structure; Rush-Larsen method; cardiac electric activity; cardiac electrophysiological models; implicit-explicit Runge-Kutta method; ionic currents; mathematical models; myocardial cell level; ordinary differential equations; splitting methods; tissue-scale models; Cardiac tissue; Computational modeling; Computer science; Costs; Differential equations; Drugs; Electrophysiology; Heart; Mathematical model; Myocardium; Efficient numerical methods; Rush–Larsen method; implicit–explicit Runge–Kutta (IMEX-RK) methods; ordinary differential equations (ODEs); simulation of electrophysiological models; splitting methods; Action Potentials; Animals; Computer Simulation; Heart Conduction System; Humans; Ion Channel Gating; Ion Channels; Models, Cardiovascular; Myocytes, Cardiac; Numerical Analysis, Computer-Assisted; Reproducibility of Results; Sensitivity and Specificity;
fLanguage
English
Journal_Title
Biomedical Engineering, IEEE Transactions on
Publisher
ieee
ISSN
0018-9294
Type
jour
DOI
10.1109/TBME.2007.914677
Filename
4490081
Link To Document