• DocumentCode
    1132397
  • Title

    On the Performance of an Implicit–Explicit Runge--Kutta Method in Models of Cardiac Electrical Activity

  • Author

    Spiteri, Raymond J. ; Dean, Ryan C.

  • Author_Institution
    Univ. of Saskatchewan, Saskatoon
  • Volume
    55
  • Issue
    5
  • fYear
    2008
  • fDate
    5/1/2008 12:00:00 AM
  • Firstpage
    1488
  • Lastpage
    1495
  • Abstract
    Mathematicalmodels of electric activity in cardiac tissue are becoming increasingly powerful tools in the study of cardiac arrhythmias. Considered here are mathematical models based on ordinary differential equations (ODEs) that describe the ionic currents at the myocardial cell level. Generating an efficient numerical solution of these ODEs is a challenging task, and, in fact, the physiological accuracy of tissue-scale models is often limited by the efficiency of the numerical solution process. In this paper, we examine the efficiency of the numerical solution of four cardiac electrophysiological models using implicit-explicit Runge-Kutta (IMEX-RK) splitting methods. We find that variable step-size implementations of IMEX-RK methods (ARK3 and ARK5) that take advantage of Jacobian structure clearly outperform the methods commonly used in practice.
  • Keywords
    Runge-Kutta methods; bioelectric potentials; biological tissues; cellular biophysics; differential equations; electrocardiography; physiological models; Jacobian structure; Rush-Larsen method; cardiac electric activity; cardiac electrophysiological models; implicit-explicit Runge-Kutta method; ionic currents; mathematical models; myocardial cell level; ordinary differential equations; splitting methods; tissue-scale models; Cardiac tissue; Computational modeling; Computer science; Costs; Differential equations; Drugs; Electrophysiology; Heart; Mathematical model; Myocardium; Efficient numerical methods; Rush–Larsen method; implicit–explicit Runge–Kutta (IMEX-RK) methods; ordinary differential equations (ODEs); simulation of electrophysiological models; splitting methods; Action Potentials; Animals; Computer Simulation; Heart Conduction System; Humans; Ion Channel Gating; Ion Channels; Models, Cardiovascular; Myocytes, Cardiac; Numerical Analysis, Computer-Assisted; Reproducibility of Results; Sensitivity and Specificity;
  • fLanguage
    English
  • Journal_Title
    Biomedical Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9294
  • Type

    jour

  • DOI
    10.1109/TBME.2007.914677
  • Filename
    4490081