DocumentCode :
1132397
Title :
On the Performance of an Implicit–Explicit Runge--Kutta Method in Models of Cardiac Electrical Activity
Author :
Spiteri, Raymond J. ; Dean, Ryan C.
Author_Institution :
Univ. of Saskatchewan, Saskatoon
Volume :
55
Issue :
5
fYear :
2008
fDate :
5/1/2008 12:00:00 AM
Firstpage :
1488
Lastpage :
1495
Abstract :
Mathematicalmodels of electric activity in cardiac tissue are becoming increasingly powerful tools in the study of cardiac arrhythmias. Considered here are mathematical models based on ordinary differential equations (ODEs) that describe the ionic currents at the myocardial cell level. Generating an efficient numerical solution of these ODEs is a challenging task, and, in fact, the physiological accuracy of tissue-scale models is often limited by the efficiency of the numerical solution process. In this paper, we examine the efficiency of the numerical solution of four cardiac electrophysiological models using implicit-explicit Runge-Kutta (IMEX-RK) splitting methods. We find that variable step-size implementations of IMEX-RK methods (ARK3 and ARK5) that take advantage of Jacobian structure clearly outperform the methods commonly used in practice.
Keywords :
Runge-Kutta methods; bioelectric potentials; biological tissues; cellular biophysics; differential equations; electrocardiography; physiological models; Jacobian structure; Rush-Larsen method; cardiac electric activity; cardiac electrophysiological models; implicit-explicit Runge-Kutta method; ionic currents; mathematical models; myocardial cell level; ordinary differential equations; splitting methods; tissue-scale models; Cardiac tissue; Computational modeling; Computer science; Costs; Differential equations; Drugs; Electrophysiology; Heart; Mathematical model; Myocardium; Efficient numerical methods; Rush–Larsen method; implicit–explicit Runge–Kutta (IMEX-RK) methods; ordinary differential equations (ODEs); simulation of electrophysiological models; splitting methods; Action Potentials; Animals; Computer Simulation; Heart Conduction System; Humans; Ion Channel Gating; Ion Channels; Models, Cardiovascular; Myocytes, Cardiac; Numerical Analysis, Computer-Assisted; Reproducibility of Results; Sensitivity and Specificity;
fLanguage :
English
Journal_Title :
Biomedical Engineering, IEEE Transactions on
Publisher :
ieee
ISSN :
0018-9294
Type :
jour
DOI :
10.1109/TBME.2007.914677
Filename :
4490081
Link To Document :
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