DocumentCode :
116804
Title :
Development of a parallel program to perform a permutation test with the use of GPU
Author :
Yakimenko, A.A. ; Khairetdinov, M.S. ; Avrorov, S.A.
Author_Institution :
Novosibirsk State Tech. Univ., Novosibirsk, Russia
fYear :
2014
fDate :
2-4 Oct. 2014
Firstpage :
723
Lastpage :
727
Abstract :
This paper proposes an algorithmic approach and program for solving search problems statistically significant over the biological characteristics of genes in a given set. The problem is connected with the implementation of well known in biology permutation (randomization) test. By taking into account the potential parallelism permutation test developed in parallel with the implementation of a program to graphically processors. Provides estimates of the effectiveness of the application of the developed program on empirical material.
Keywords :
graphics processing units; parallel programming; GPU; algorithmic approach; biological characteristics; biology permutation; parallel program development; permutation test performance; potential parallelism permutation; Acceleration; Arrays; Biology; Educational institutions; Graphics processing units; Software algorithms; GPU; modeling; parallelization;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Actual Problems of Electronics Instrument Engineering (APEIE), 2014 12th International Conference on
Conference_Location :
Novosibirsk
Print_ISBN :
978-1-4799-6019-4
Type :
conf
DOI :
10.1109/APEIE.2014.7040780
Filename :
7040780
Link To Document :
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