Title :
Detecting Space-Time Alternating Biological Signals Close to the Bifurcation Point
Author :
Jia, Zhiheng ; Bien, Harold ; Entcheva, Emilia
Author_Institution :
Dept. of Biomed. Eng., Stony Brook Univ., Stony Brook, NY, USA
Abstract :
Time-alternating biological signals, i.e., alternans, arise in variety of physiological states marked by dynamic instabilities, e.g., period doubling. Normally, a sequence of large-small-large transients, they can exhibit variable patterns over time and space, including spatial discordance. Capture of the early formation of such alternating regions is challenging because of the spatiotemporal similarities between noise and the small-amplitude alternating signals close to the bifurcation point. We present a new approach for automatic detection of alternating signals in large noisy spatiotemporal datasets by exploiting quantitative measures of alternans evolution, e.g., temporal persistence, and by preserving phase information. The technique specifically targets low amplitude, relatively short alternating sequences and is validated by combinatorics-derived probabilities and empirical datasets with white noise. Using high-resolution optical mapping in live cardiomyocyte networks, exhibiting calcium alternans, we reveal for the first time early fine-scale alternans, close to the noise level, which are linked to the later formation of larger regions and evolution of spatially discordant alternans. This robust method aims at quantification and better understanding of the onset of cardiac arrhythmias and can be applied to general analysis of space-time alternating signals, including the vicinity of the bifurcation point.
Keywords :
bifurcation; cardiology; cellular biophysics; medical signal processing; probability; spatiotemporal phenomena; temporal databases; automatic detection; bifurcation point; calcium alternans; cardiac arrhythmias; combinatorics-derived probability; dynamic instability; empirical datasets; fine-scale alternans; high-resolution optical mapping; large-small-large transient sequence; live cardiomyocyte networks; noise level; noisy spatiotemporal datasets; period doubling; physiological states; space-time alternating biological signals; spatial discordance; spatially discordant alternans; temporal persistence; Bifurcation; Biomedical optical imaging; Evolution (biology); Optical noise; Phase detection; Phase measurement; Phase noise; Signal detection; Spatiotemporal phenomena; White noise; Alternans detection; bifurcation point; space-time; temporal persistence; Algorithms; Databases, Factual; Electrocardiography; Models, Biological; Myocytes, Cardiac; Reproducibility of Results; Signal Processing, Computer-Assisted;
Journal_Title :
Biomedical Engineering, IEEE Transactions on
DOI :
10.1109/TBME.2009.2028652