DocumentCode :
1392843
Title :
Quantifying evolvability in small biological networks
Author :
Mugler, A. ; Ziv, E. ; Nemenman, I. ; Wiggins, C.H.
Author_Institution :
Dept. of Phys., Columbia Univ., New York, NY, USA
Volume :
3
Issue :
5
fYear :
2009
fDate :
9/1/2009 12:00:00 AM
Firstpage :
379
Lastpage :
387
Abstract :
The authors introduce a quantitative measure of the capacity of a small biological network to evolve. The measure is applied to a stochastic description of the experimental setup of Guet et al. (Science 2002, 296, pp. 1466), treating chemical inducers as functional inputs to biochemical networks and the expression of a reporter gene as the functional output. The authors take an information-theoretic approach, allowing the system to set parameters that optimise signal processing ability, thus enumerating each network´s highest-fidelity functions. All networks studied are highly evolvable by the measure, meaning that change in function has little dependence on change in parameters. Moreover, each network´s functions are connected by paths in the parameter space along which information is not significantly lowered, meaning a network may continuously change its functionality without completely losing it along the way. This property further underscores the evolvability of the networks.
Keywords :
biochemistry; biocybernetics; evolution (biological); information theory; molecular biophysics; biochemical network functional inputs; chemical inducers; evolvability quantification; functional output; information theoretic approach; parameter space; reporter gene expression; small biological networks;
fLanguage :
English
Journal_Title :
Systems Biology, IET
Publisher :
iet
ISSN :
1751-8849
Type :
jour
DOI :
10.1049/iet-syb.2008.0165
Filename :
5243215
Link To Document :
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