DocumentCode
139332
Title
An adaptive phase-locking insight to unravel mRNAs synchronyfrom microarray experiments
Author
Mariusz, Leslaw Zoltowski
Author_Institution
Coll. Medicum Pharmacy Dept. of, Nicolaus Copernicus Univ. of Torun, Torun, Poland
fYear
2014
fDate
26-30 Aug. 2014
Firstpage
1006
Lastpage
1009
Abstract
A bulk mRNA expression time course can slow or advance modulating in phase the averaged expression of each gene within the cell-cycle. This is also a synchronism induced at the cycle start to recognize periodic genes. Consistent with the above, a novel adaptive phase-locking insight into microarray experiment is provided. The budding-yeast expression of the major role in the cell-division-cycle could be clustered in phase by a new amplitude noise immune approach which compares well to meta-analysis of the web Cyclebase and to previous results in the field. The new approach to timing elucidation seems to be well matched to cellular phenomena and might be promising as the most accurate ever applied in Fourier context.
Keywords
RNA; bioinformatics; cellular biophysics; genetics; genomics; lab-on-a-chip; microorganisms; molecular biophysics; Web Cyclebase; adaptive phase-locking; amplitude noise immune approach; budding-yeast expression; cell-division-cycle; cellular phenomena; gene expression; mRNA synchronyfrom microarray experiments; meta-analysis; phase modulation; Cells (biology); Finite impulse response filters; Indexes; Noise; Oscillators; Timing;
fLanguage
English
Publisher
ieee
Conference_Titel
Engineering in Medicine and Biology Society (EMBC), 2014 36th Annual International Conference of the IEEE
Conference_Location
Chicago, IL
ISSN
1557-170X
Type
conf
DOI
10.1109/EMBC.2014.6943763
Filename
6943763
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