Title :
Bayesian
-Space–Time Reconstruction of MR Spectroscopic Imaging for Enhanced Resolution
Author :
Kornak, John ; Young, Karl ; Soher, Brian J. ; Maudsley, Andrew A.
Author_Institution :
Dept. of Radiol. & Biomed. Imaging, Univ. of California, San Francisco, CA, USA
fDate :
7/1/2010 12:00:00 AM
Abstract :
A k -space-time Bayesian statistical reconstruction method (K-Bayes) is proposed for the reconstruction of metabolite images of the brain from proton (1 H) magnetic resonance (MR) spectroscopic imaging (MRSI) data. K-Bayes performs full spectral fitting of the data while incorporating structural (anatomical) spatial information through the prior distribution. K-Bayes provides increased spatial resolution over conventional discrete Fourier transform (DFT) based methods by incorporating structural information from higher resolution coregistered and segmented structural MR images. The structural information is incorporated via a Markov random field (MRF) model that allows for differential levels of expected smoothness in metabolite levels within homogeneous tissue regions and across tissue boundaries. By further combining the structural prior model with a k -space-time MRSI signal and noise model (for a specific set of metabolites and based on knowledge from prior spectral simulations of metabolite signals), the impact of artifacts generated by low-resolution sampling is also reduced. The posterior-mode estimates are used to define the metabolite map reconstructions, obtained via a generalized expectation-maximization algorithm. K-Bayes was tested using simulated and real MRSI datasets consisting of sets of k-space-time-series (the recorded free induction decays). The results demonstrated that K-Bayes provided qualitative and quantitative improvement over DFT methods.
Keywords :
Bayes methods; Markov processes; biological tissues; biomedical MRI; brain; discrete Fourier transforms; expectation-maximisation algorithm; image enhancement; image reconstruction; image registration; image resolution; image segmentation; medical image processing; random processes; sampling methods; K-Bayes; MRSI; Markov random field; anatomical spatial information; artifacts; brain; coregistered structural MR images; discrete Fourier transform; free induction decay; full spectral fitting; generalized expectation-maximization algorithm; homogeneous tissue regions; k-space-time Bayesian statistical reconstruction method; k-space-time-series; low-resolution sampling; metabolite image reconstruction; metabolite map reconstructions; metabolite signal spectral simulations; noise model; posterior-mode estimates; proton magnetic resonance spectroscopic imaging; segmented structural MR images; spatial resolution; structural prior model; structural spatial information; tissue boundaries; Bayesian methods; Discrete Fourier transforms; High-resolution imaging; Image reconstruction; Magnetic resonance; Magnetic resonance imaging; Protons; Reconstruction algorithms; Spatial resolution; Spectroscopy; Bayesian image analysis; K-Bayes; MRSI reconstruction; expectation maximization (EM); magnetic resonance (MR); magnetic resonance spectroscopy imaging (MRSI); metabolite maps; Algorithms; Bayes Theorem; Biopolymers; Brain; Humans; Image Enhancement; Image Interpretation, Computer-Assisted; Magnetic Resonance Imaging; Magnetic Resonance Spectroscopy; Pattern Recognition, Automated; Reproducibility of Results; Sensitivity and Specificity;
Journal_Title :
Medical Imaging, IEEE Transactions on
DOI :
10.1109/TMI.2009.2037956