• DocumentCode
    1447440
  • Title

    Spike Sorting by Stochastic Simulation

  • Author

    Ge, Di ; Carpentier, Eric Le ; Idier, Jérôme ; Farina, Dario

  • Author_Institution
    Glaizer Groupe, Malakoff, France
  • Volume
    19
  • Issue
    3
  • fYear
    2011
  • fDate
    6/1/2011 12:00:00 AM
  • Firstpage
    249
  • Lastpage
    259
  • Abstract
    The decomposition of multiunit signals consists of the restoration of spike trains and action potentials in neural or muscular recordings. Because of the complexity of automatic decomposition, semiautomatic procedures are sometimes chosen. The main difficulty in automatic decomposition is the resolution of temporally overlapped potentials. In a previous study , we proposed a Bayesian model coupled with a maximum a posteriori (MAP) estimator for fully automatic decomposition of multiunit recordings and we showed applications to intramuscular EMG signals. In this study, we propose a more complex signal model that includes the variability in amplitude of each unit potential. Moreover, we propose the Markov Chain Monte Carlo (MCMC) simulation and a Bayesian minimum mean square error (MMSE) estimator by averaging on samples that converge in distribution to the joint posterior law. We prove the convergence property of this approach mathematically and we test the method representatively on intramuscular multiunit recordings. The results showed that its average accuracy in spike identification is greater than 90% for intramuscular signals with up to 8 concurrently active units. In addition to intramuscular signals, the method can be applied for spike sorting of other types of multiunit recordings.
  • Keywords
    Bayes methods; Markov processes; Monte Carlo methods; electromyography; maximum likelihood estimation; medical signal processing; neurophysiology; Bayesian minimum mean square error; Bayesian model; MAP estimator; Markov Chain Monte Carlo; action potentials; automatic decomposition; intramuscular EMG signal; maximum a posteriori estimator; multiunit signal decomposition; muscular recording; neural recording; spike sorting; spike train restoration; stochastic simulation; temporally overlapped potentials; Bayesian methods; Discharges; Electromyography; Joints; Markov processes; Shape; Sorting; Bayesian model; Markov chain Monte Carlo; intramuscular EMG decomposition; minimum mean square error (MMSE) estimation; Adult; Algorithms; Bayes Theorem; Computer Simulation; Electromyography; Evoked Potentials; Humans; Male; Markov Chains; Models, Statistical; Monte Carlo Method; Muscle, Skeletal; Reproducibility of Results; Signal Processing, Computer-Assisted; Stochastic Processes; Young Adult;
  • fLanguage
    English
  • Journal_Title
    Neural Systems and Rehabilitation Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    1534-4320
  • Type

    jour

  • DOI
    10.1109/TNSRE.2011.2112780
  • Filename
    5710985