Visualizing large-scale genomic sequences

Author

Glusman, Gustavo ; Lancet, Doron

Author_Institution

Dept. of Molecular Genetics, Weizmann Inst. of Sci., Rehovot, Israel

Volume

20

Issue

4

fYear

2001

Firstpage

49

Lastpage

54

Abstract

We discuss the GESTALT Workbench, which we have developed for large-scale genomic sequence data, with strong emphasis on the production of enriched graphical representation of the analysed data. It cam execute a variety of external analysis programs (e.g. gene recognition) as well as internal analyses (e.g. computational complexity).

Keywords

biology computing; data visualisation; genetics; graphical user interfaces; interactive programming; online front-ends; software tools; GESTALT Workbench; Web-based user interface; annotation; browser; computational complexity; enriched graphical representation; external analysis; gene recognition; interactive genome graphs; internal analysis; large-scale genomic sequences; pictorial output; sequence visualisation; Bioinformatics; Data analysis; Data visualization; Genomics; Image sequence analysis; Large-scale systems; Navigation; Pattern analysis; Pattern recognition; Performance analysis; Computational Biology; Computer Graphics; Genomics; Humans; Sequence Analysis, DNA;

fLanguage

English

Journal_Title

Engineering in Medicine and Biology Magazine, IEEE

Publisher

ieee

ISSN

0739-5175

Type

jour

DOI

10.1109/51.940046

Filename

940046