DocumentCode :
1520795
Title :
A Boosted Bayesian Multiresolution Classifier for Prostate Cancer Detection From Digitized Needle Biopsies
Author :
Doyle, Scott ; Feldman, Michael ; Tomaszewski, John ; Madabhushi, Anant
Author_Institution :
Dept. of Biomed. Eng., Rutgers Univ., Piscataway, NJ, USA
Volume :
59
Issue :
5
fYear :
2012
fDate :
5/1/2012 12:00:00 AM
Firstpage :
1205
Lastpage :
1218
Abstract :
Diagnosis of prostate cancer (CaP) currently involves examining tissue samples for CaP presence and extent via a microscope, a time-consuming and subjective process. With the advent of digital pathology, computer-aided algorithms can now be applied to disease detection on digitized glass slides. The size of these digitized histology images (hundreds of millions of pixels) presents a formidable challenge for any computerized image analysis program. In this paper, we present a boosted Bayesian multiresolution (BBMR) system to identify regions of CaP on digital biopsy slides. Such a system would serve as an important preceding step to a Gleason grading algorithm, where the objective would be to score the invasiveness and severity of the disease. In the first step, our algorithm decomposes the whole-slide image into an image pyramid comprising multiple resolution levels. Regions identified as cancer via a Bayesian classifier at lower resolution levels are subsequently examined in greater detail at higher resolution levels, thereby allowing for rapid and efficient analysis of large images. At each resolution level, ten image features are chosen from a pool of over 900 first-order statistical, second-order co-occurrence, and Gabor filter features using an AdaBoost ensemble method. The BBMR scheme, operating on 100 images obtained from 58 patients, yielded: 1) areas under the receiver operating characteristic curve (AUC) of 0.84, 0.83, and 0.76, respectively, at the lowest, intermediate, and highest resolution levels and 2) an eightfold savings in terms of computational time compared to running the algorithm directly at full (highest) resolution. The BBMR model outperformed (in terms of AUC): 1) individual features (no ensemble) and 2) a random forest classifier ensemble obtained by bagging multiple decision tree classifiers. The apparent drop-off in AUC at higher image resolutions is due to lack of fine detail in the expert annotation of CaP and is not an artifact of the- classifier. The implicit feature selection done via the AdaBoost component of the BBMR classifier reveals that different classes and types of image features become more relevant for discriminating between CaP and benign areas at different image resolutions.
Keywords :
CAD; Gabor filters; belief networks; biomedical optical imaging; cancer; computerised instrumentation; decision trees; feature extraction; image classification; image resolution; medical image processing; needles; AdaBoost ensemble method; Gabor filter features; Gleason grading algorithm; boosted Bayesian multiresolution classifier; computer-aided algorithms; computerized image analysis program; digital pathology; digitized glass slides; digitized histology images; digitized needle biopsies; feature selection; first-order statistical features; image features; image pyramid; image resolutions; multiple decision tree classifiers; multiple resolution levels; prostate cancer detection; prostate cancer diagnosis; tissue samples; whole-slide image; Bayesian methods; Biopsy; Cancer detection; Classification tree analysis; Diseases; Image analysis; Image resolution; Microscopy; Needles; Prostate cancer; Computer-aided detection (CAD); histology; prostate cancer (CaP); quantification; supervised classification; Algorithms; Bayes Theorem; Biopsy, Needle; Humans; Image Interpretation, Computer-Assisted; Male; Prostatic Neoplasms;
fLanguage :
English
Journal_Title :
Biomedical Engineering, IEEE Transactions on
Publisher :
ieee
ISSN :
0018-9294
Type :
jour
DOI :
10.1109/TBME.2010.2053540
Filename :
5491097
Link To Document :
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