• DocumentCode
    1548412
  • Title

    Visualizing Cells and Humans in 3D: Biomedical Image Analysis at Nanometer and Meter Scales

  • Author

    Yoo, T.S. ; Bliss, D. ; Lowekamp, B.C. ; Chen, D.T. ; Murphy, G.E. ; Narayan, K. ; Hartnell, L.M. ; Thao Do ; Subramaniam, Suresh

  • Author_Institution
    US Nat. Libr. of Med., USA
  • Volume
    32
  • Issue
    5
  • fYear
    2012
  • Firstpage
    39
  • Lastpage
    49
  • Abstract
    Researchers analyzed and presented volume data from the Visible Human Project (VHP) and data from high-resolution 3D ion-abrasion scanning electron microscopy (IA-SEM). They acquired the VHP data using cryosectioning, a destructive approach to 3D human anatomical imaging resulting in whole-body images with a field of view approaching 2 meters and a minimum resolvable feature size of 300 microns. IA-SEM is a type of block-face imaging microscopy, a destructive approach to microscopic 3D imaging of cells. The field of view of IA-SEM data is on the order of 10 microns (whole cell) with a minimum resolvable feature size of 15 nanometers (single-slice thickness). Despite the difference in subject and scale, the analysis and modeling methods were remarkably similar. They are derived from image processing, computer vision, and computer graphics techniques. Moreover, together we are employing medical illustration, visualization, and rapid prototyping to inform and inspire biomedical science. By combining graphics and biology, we are imaging across nine orders of magnitude of space to better promote public health through research.
  • Keywords
    cellular biophysics; computer vision; data visualisation; medical computing; medical image processing; scanning electron microscopy; solid modelling; 3D cell visualization; 3D human anatomical imaging; 3D human visualization; VHP data; biomedical image analysis; biomedical science; block-face imaging microscopy; computer graphics; computer vision; cryosectioning; field of view; high-resolution 3D IA-SEM; high-resolution 3D ion-abrasion scanning electron microscopy; image processing; medical illustration; microscopic 3D imaging; rapid prototyping; visible human project; whole-body images; Biomedical image processing; Computational modeling; Human factors; Image resolution; Nanobioscience; Pattern recognition; Scanning electron microscopy; Science - general; Visualization; Biomedical image processing; Computational modeling; Human factors; Image resolution; Nanobioscience; Pattern recognition; Scanning electron microscopy; Science - general; Visualization; computer applications; computer graphics; computer vision computing methodologies; image processing; life and medical sciences; modeling; pattern recognition; segmentation; simulation; visualization; visualization techniques and methodologies; volume visualization;
  • fLanguage
    English
  • Journal_Title
    Computer Graphics and Applications, IEEE
  • Publisher
    ieee
  • ISSN
    0272-1716
  • Type

    jour

  • DOI
    10.1109/MCG.2012.68
  • Filename
    6226336