DocumentCode
1558814
Title
Automated assignment of backbone NMR peaks using constrained bipartite matching
Author
Xu, Ying ; Xu, Dong ; Dongsup Kai ; Olman, Victor ; Razumovskaya, Jane ; Jiang, Tao
Author_Institution
Life Sci. Div., Oak Ridge Nat. Lab., TN, USA
Volume
4
Issue
1
fYear
2002
Firstpage
50
Lastpage
62
Abstract
Peak assignment is a key step in solving protein structures using nuclear magnetic resonance. The authors present a new computational framework for automating this process, particularly for backbone resonance peak assignment, as a constrained weighted bipartite matching problem. Although it´s NP-hard, they have developed a rigorous algorithm to solve the problem
Keywords
NMR spectroscopy; computational complexity; nuclear magnetic resonance; pattern matching; proteins; spectroscopy computing; NP-hard; backbone resonance peak assignment; computational framework; constrained weighted bipartite matching; nuclear magnetic resonance; peak assignment; protein structures; Accuracy; Amino acids; Chemicals; Fuzzy logic; Joining processes; Magnetic resonance; Nuclear magnetic resonance; Protein engineering; Spectroscopy; Spine;
fLanguage
English
Journal_Title
Computing in Science & Engineering
Publisher
ieee
ISSN
1521-9615
Type
jour
DOI
10.1109/5992.976437
Filename
976437
Link To Document