DocumentCode :
1588200
Title :
Modeling and Verifying WNT Signaling Pathway
Author :
Xu, Xian ; Yu, Yanbin
Author_Institution :
Shanghai Jiao Tong Univ., Shanghai
Volume :
2
fYear :
2007
Firstpage :
319
Lastpage :
323
Abstract :
WNT signaling pathway is an important pathway in the development and disease forming of a variety of animals, concerning such processes as hematopoiesis and oncogenesis. In this paper we use quantitative approach to study the canonical pathway of WNT signaling. We first present the basic knowledge of the WNT signaling pathway, including the necessary elements on the pathway, then in troduce the modeling method, the tissue P system, which is a computational device inspired from the behavior of living cells. After that we construct the model of the WNT signaling pathway using the tissue P system. Moreover, we implement the model using Maude, a rewriting logic based interpreter software. Provided with the model implementation, we model check some critical properties on several nodes of the WNT signaling pathway, to show the effect of the modeling and implementation. We draw the conclusion in the end.
Keywords :
biology computing; diseases; program interpreters; program verification; rewriting systems; Maude; WNT signaling pathway; disease forming; hematopoiesis; interpreter software; oncogenesis; rewriting logic; tissue P system; Animal structures; Biological system modeling; Biology; Communication system control; Computer science; Control systems; Diseases; Logic devices; Power system modeling; Signal processing; Modeling; Signaling pathway; Tissue P systems.; Verification; WNT;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Natural Computation, 2007. ICNC 2007. Third International Conference on
Conference_Location :
Haikou
Print_ISBN :
978-0-7695-2875-5
Type :
conf
DOI :
10.1109/ICNC.2007.476
Filename :
4344368
Link To Document :
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