Title :
Minimal Quadtree Format for Compression of Sparse Matrices Storage
Author :
Simecek, Ivan ; Langr, Daniel ; Tvrdik, Pavel
Author_Institution :
Dept. of Comput. Syst., Czech Tech. Univ. in Prague, Prague, Czech Republic
Abstract :
Computations with sparse matrices are widespread in scientific projects. Commonly used storage formats (such as COO or CSR) are not suitable for I/O file operations with sparse matrices due to their high space complexities. Memory-efficient formats are still under development. In this paper, we present a new storage format called the Minimal quadtree (MQ) as well as algorithms for converting matrices from common storage formats to the MQ format. We compare the space complexity of common storage formats and of the MQ format and prove that the idea of using the quadtree as the data structure for sparse matrices is viable.
Keywords :
computational complexity; data compression; quadtrees; sparse matrices; storage management; COO; CSR; I/O file operations; MQ format; data structure; memory-efficient formats; minimal quadtree format; space complexity; sparse matrix computation; sparse matrix storage compression; storage formats; Arrays; Indexes; Matrix converters; Sparse matrices; Tiles; Time complexity; memory-efficient formats; numerical linear algebra; quadtree format; sparse matrix storage format;
Conference_Titel :
Symbolic and Numeric Algorithms for Scientific Computing (SYNASC), 2012 14th International Symposium on
Conference_Location :
Timisoara
Print_ISBN :
978-1-4673-5026-6
DOI :
10.1109/SYNASC.2012.30