DocumentCode :
1631929
Title :
An improving gene selection for microarray data
Author :
Lee, Chou-Yuan ; Lee, Zne-Jung ; Weng, Yu-Lin
Author_Institution :
Dept. of Inf. Manage., Lan Yang Inst. of Technol., Taiwan
fYear :
2009
Firstpage :
1255
Lastpage :
1258
Abstract :
The microarray data consists of tens of thousands of genes on a genomic scale. To avoid higher computational complexity, it needs gene selection to find the gene subsets that are able to explain the disease. In this paper, an improving gene selection for microarray data is proposed. In the proposed algorithm, scatter search is used to obtain suitable parameter settings for support vector machine and then a subset of beneficial genes is selected. These selected genes can increase the accuracy of classification for microarray data. From experimental results, it shows that the proposed algorithm can obtain a better parameter setting and reduce unnecessary genes.
Keywords :
bioinformatics; computational complexity; diseases; fuzzy set theory; genetics; genomics; learning (artificial intelligence); pattern classification; pattern clustering; search problems; support vector machines; computational complexity; disease; fuzzy c-means algorithm; gene selection; genomic scale; machine learning; microarray data classification; scatter search; support vector machine; Bioinformatics; Computational complexity; Diseases; Equations; Genomics; Lagrangian functions; Polynomials; Scattering parameters; Support vector machine classification; Support vector machines;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Fuzzy Systems, 2009. FUZZ-IEEE 2009. IEEE International Conference on
Conference_Location :
Jeju Island
ISSN :
1098-7584
Print_ISBN :
978-1-4244-3596-8
Electronic_ISBN :
1098-7584
Type :
conf
DOI :
10.1109/FUZZY.2009.5277430
Filename :
5277430
Link To Document :
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