Title :
Docking scores and QSAR using evolved neural networks for the Pan-inhibition of wild-type and mutant PfDHFR by cycloguanil derivatives
Author :
Hecht, David ; Cheung, Mars ; Fogel, Gary B.
Author_Institution :
Southwestern Coll., Chula Vista, CA
Abstract :
Linear and nonlinear quantitative structure-activity relationship (QSAR) models and docking score functions were developed for dihydrofolate reductase (DHFR) inhibition by cycloguanil derivatives using small molecule descriptors derived from MOE and in silico docking energies. The best QSAR models and docking score functions were identified when using artificial neural networks optimized by evolutionary computation. The resulting models can be used to identify key descriptors for DHFR inhibition and are useful for high-throughput screening of novel drug compounds.
Keywords :
chemistry computing; evolutionary computation; neural nets; QSAR models; artificial neural network; cycloguanil derivative; dihydrofolate reductase inhibition; docking score function; evolutionary computation; evolved neural networks; molecule descriptors; quantitative structure-activity relationship; Artificial neural networks; Drugs; Evolutionary computation; Libraries; Mars; Neural networks; Plasma stability; Predictive models; Protein engineering; Software packages;
Conference_Titel :
Evolutionary Computation, 2009. CEC '09. IEEE Congress on
Conference_Location :
Trondheim
Print_ISBN :
978-1-4244-2958-5
Electronic_ISBN :
978-1-4244-2959-2
DOI :
10.1109/CEC.2009.4982957