• DocumentCode
    1639454
  • Title

    Physical understanding via reduction of complex multiscale models: Glycolysis in saccharomyces cerevisiae

  • Author

    Kourdis, Panayotis D. ; Goussis, Dimitris A. ; Steuer, Ralf

  • Author_Institution
    Sch. of Appl. Math. & Phys., Nat. Tech. Univ., Athens
  • fYear
    2008
  • Firstpage
    1
  • Lastpage
    6
  • Abstract
    We consider complex mathematical models that are characterized by a wide spectrum of time scales, the fastest of which are operative during the initial state only, leaving the slower ones to drive the system at later times. It is shown that very useful physical understanding can be acquired if the fast and slow dynamics are first separated and then analyzed. Existing algorithmic methodologies can be applied for this purpose. A demonstration of this approach is presented for a glycolysis model, the solution of which asymptotically evolves around a limit cycle.
  • Keywords
    biology computing; microorganisms; reduced order systems; sugar; complex multiscale model reduction; glycolysis; saccharomyces cerevisiae; Algorithm design and analysis; Biological system modeling; Computational biology; Evolution (biology); Fungi; Genetics; Iterative algorithms; Limit-cycles; Mathematical model; Size measurement;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    BioInformatics and BioEngineering, 2008. BIBE 2008. 8th IEEE International Conference on
  • Conference_Location
    Athens
  • Print_ISBN
    978-1-4244-2844-1
  • Electronic_ISBN
    978-1-4244-2845-8
  • Type

    conf

  • DOI
    10.1109/BIBE.2008.4696657
  • Filename
    4696657