• DocumentCode
    1639481
  • Title

    Validating models of bacterial chemotaxis by simulating the random motility coefficient

  • Author

    Zhiyu Wang ; MinJun Kim ; Rosen, Gail

  • Author_Institution
    Dept. of Electr. & Comput. Eng., Drexel Univ., Philadelphia, PA
  • fYear
    2008
  • Firstpage
    1
  • Lastpage
    5
  • Abstract
    In order to characterize the random walk of E. coli, biologists have studied several parameters, such as the motility speed, run duration, and random motility coefficient. Previously, biologists indicated that the probability distributions of these parameters may vary depending on the presence or absence of a chemical gradient in the environment. For instance, in a gradient, the cell of E. coli exhibits a biased-random walk. Although it is suggested that the parameter distributions change from unbiased to biased conditions, there are contradicting reports of the actual distributions since they are usually derived from observations of cell movement. In this paper, we consider the problem conversely. We try hypotheses for the parameter distributions respectively for the unbiased and biased cases to simulate random walks. Then we can validate our chemotaxis model through the simulated random motility coefficient, under unbiased and biased environments.
  • Keywords
    biochemistry; cell motility; microorganisms; random processes; statistical distributions; E. coli; bacterial chemotaxis model; biased-random walk; chemical gradient; parameter distributions; probability distributions; random motility coefficient; Biological system modeling; Chemicals; Displays; Drives; Mathematical model; Microorganisms; Microscopy; Probability distribution; Propulsion; Tracking; Chemotaxis; E. coli; Random motility coefficient; Random walk;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    BioInformatics and BioEngineering, 2008. BIBE 2008. 8th IEEE International Conference on
  • Conference_Location
    Athens
  • Print_ISBN
    978-1-4244-2844-1
  • Electronic_ISBN
    978-1-4244-2845-8
  • Type

    conf

  • DOI
    10.1109/BIBE.2008.4696658
  • Filename
    4696658