Title :
VFGO: Mapping Gene Ontology into Relational Database for Exploratory Data Analysis
Author :
Zhou, Ping ; Sun, Mei ; Ding, Kuke ; Ma, Yujing
Author_Institution :
Sch. of Biomed. Eng., Capital Med. Univ., Beijing
Abstract :
We design a database VFGO which is use Visual FoxPro programming language. The VFGO includes four relational tables that were changed from Gene Ontology (GO) files. The VFGO also includes the changing programs and database application programs. Users can do their exploratory data analysis by accessing the VFGO tables immediately. For the users who do not know any command of Visual FoxPro, They may use the application programs to do their research. By our experiment, the VFGO is suit for using Visual FoxPro to mine GO data.
Keywords :
data mining; expert systems; genetics; medical computing; object-oriented languages; ontologies (artificial intelligence); VFGO; Visual FoxPro programming language; data mining; database application program; exploratory data analysis; gene ontology; gene ontology files; Application software; Biological processes; Biomedical engineering; Computer science; Data analysis; Data mining; Electronic design automation and methodology; Ontologies; Relational databases; Visual databases;
Conference_Titel :
Bioinformatics and Biomedical Engineering, 2008. ICBBE 2008. The 2nd International Conference on
Conference_Location :
Shanghai
Print_ISBN :
978-1-4244-1747-6
Electronic_ISBN :
978-1-4244-1748-3
DOI :
10.1109/ICBBE.2008.199
