DocumentCode :
1674842
Title :
A Functional Workbench for Anopheles gambiae Micro Array Analysis
Author :
Adebiyi, Marion ; Oghuan, Josiah ; Fatumo, Segun ; Adebiyi, Ezekiel ; Rasgon, Jason
Author_Institution :
Dept. of Comput. & Inf. Sci., Covenant Univ., Ota, Nigeria
fYear :
2013
Firstpage :
138
Lastpage :
143
Abstract :
Insecticide resistance, a character inherited that encompasses alteration in one or more of insect´s genes is now a major public health challenge combating world efforts on malaria control strategies. Anopheles has developed heavy resistance to pyrethroids, the only World Health Organization (WHO) recommended class for Indoor Residual Spray (IRS) and Long-Lasting Insecticide Treated Nets (LLITNs) through P450 pathways. We used the biochemical network of Anopheles gambiae (henceforth Ag) to deduce its resistance mechanism(s) using two expression data (when Ag is treated with pyrethroid and when controlled). The employed computational techniques are accessible by a robust, multi-faceted and friendly automated graphic user interface (GUI) tagged ´workbench´ with JavaFX Scenebuilder. In this work, we introduced a computational platform to determine and also elucidate for the first time resistance mechanism to a commonly used class of insecticide, Pyrethroid. Significantly, our work is the first computational work to identify genes associated or involved in the efflux system in Ag and as a resistance mechanism in the Anopheles.
Keywords :
Java; biochemistry; biology computing; diseases; genetics; graphical user interfaces; health care; lab-on-a-chip; medical computing; Anopheles gambiae microarray analysis; GUI; IRS; JavaFX Scenebuilder; LLITNs; P450 pathways; WHO; World Health Organization; biochemical network; computational platform; efflux system; functional workbench; graphic user interface; indoor residual spray; insect genes; insecticide resistance; long-lasting insecticide treated nets; malaria control strategies; public health challenge; pyrethroid; Biochemistry; Bioinformatics; Diseases; Feature extraction; Gene expression; Genomics; Immune system; Anopheles gambiae; Microarray data; and Features extraction; biochemical network; resistance mechanism;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Modelling Symposium (EMS), 2013 European
Conference_Location :
Manchester
Print_ISBN :
978-1-4799-2577-3
Type :
conf
DOI :
10.1109/EMS.2013.24
Filename :
6779835
Link To Document :
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