DocumentCode :
167691
Title :
A novel protein structure classification model
Author :
Wenzheng Bao ; Yuehui Chen ; Dong Wang
Author_Institution :
Sch. of Inf. Sci. & Eng., Univ. of Jinan, Jinan, China
fYear :
2014
fDate :
8-9 May 2014
Firstpage :
758
Lastpage :
761
Abstract :
Protein tertiary structure prediction is an important area of research in bioinformatics. In this paper, we proposed a new method to predict the tertiary structure of the protein, the method by extracting the protein sequence of the amino acid frequencies generalization dipeptide information hydrophobic combination, using neural networks and flexible neural tree classifier for different the integrated structure classification model. To evaluate the efficiency of the proposed method we choose two benchmark protein sequence datasets (640 dataset and 1189 dataset) as the test data set. The final results show that our method is efficient for protein structure prediction.
Keywords :
bioinformatics; hydrophobicity; neural nets; pattern classification; proteins; amino acid frequency generalization; benchmark protein sequence datasets; bioinformatics; dipeptide information hydrophobic combination; flexible neural tree classifier; integrated structure classification model; neural networks; protein sequence extraction; protein structure classification model; protein tertiary structure prediction; test data set; Artificial neural networks; Logistics; Prediction methods; Proteins; Flexible Neural Tree; Particle swarm optimization; Tertiary structure of protein; neural network;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Electronics, Computer and Applications, 2014 IEEE Workshop on
Conference_Location :
Ottawa, ON
Type :
conf
DOI :
10.1109/IWECA.2014.6845733
Filename :
6845733
Link To Document :
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