DocumentCode
1710898
Title
Identification of relative protein bands in polyacrylamide gel electrophoresis (PAGE) using multiresolution snake algorithm
Author
Gürcan, Metin Nafi ; Koyutürk, Mehmet ; Yildiz, H. Serkan ; Çetin-Atalay, Rengül ; Çetin, A. Enis
Author_Institution
Dept. of Electr. & Electron. Eng., Bilkent Univ., Ankara, Turkey
fYear
1998
Firstpage
277
Lastpage
280
Abstract
Polyacrylamide gel electrophoresis (PAGE) is one of the most widely used techniques in protein research. In the protein purification process, it is important to determine the efficiency of each purification step in terms of percentage of protein of interest found in the protein mixture. This study provides a rapid and reliable way to determine this percentage. The region of interest containing the protein is detected using the snake algorithm. The iterative snake algorithm is implemented in a multiresolutional framework. The snake is initialized on a low resolution image. Then, the final position of the snake at low resolution is used as the initial position in the higher resolution image. Finally, the area of the protein is estimated as the area enclosed by the final position of the snake
Keywords
chemistry computing; electrophoresis; image resolution; iterative methods; proteins; computational complexity; efficiency; iterative snake algorithm; low resolution image; multiresolution snake algorithm; polyacrylamide gel electrophoresis; protein mixture; protein purification process; protein research; relative protein bands identification; Biology; Computational complexity; Computational modeling; Electrokinetics; Genetic engineering; Image resolution; Iterative algorithms; Protein engineering; Purification; Visualization;
fLanguage
English
Publisher
ieee
Conference_Titel
Time-Frequency and Time-Scale Analysis, 1998. Proceedings of the IEEE-SP International Symposium on
Conference_Location
Pittsburgh, PA
Print_ISBN
0-7803-5073-1
Type
conf
DOI
10.1109/TFSA.1998.721415
Filename
721415
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