DocumentCode
1762597
Title
A More Scalable and Efficient Parallelization of the Adaptive Integral Method—Part II: BIOEM Application
Author
Fangzhou Wei ; Yilmaz, Ali E.
Author_Institution
Electr. & Comput. Eng. Dept., Univ. of Texas at Austin, Austin, TX, USA
Volume
62
Issue
2
fYear
2014
fDate
Feb. 2014
Firstpage
727
Lastpage
738
Abstract
The parallelization of the adaptive integral method proposed in Part I is used to solve 3-D scattering problems pertinent to bioelectromagnetic (BIOEM) analysis. Detailed numerical results are presented to quantify the computational complexity and parallel efficiency of the method on a petascale supercomputing cluster. Boundaries of acceptable parallelization regions of the method are identified in the N - P plane under realistic resource and efficiency constraints, where N and P denote the number of unknowns and processes, respectively. These regions are shown to be larger than those of an alternative parallelization method for benchmark BIOEM problems. The proposed method is also used to compute the power absorbed by an anatomical human body model to demonstrate its potential for solving complex BIOEM problems. The computations are performed for increasingly higher resolutions of the model and the power absorbed by the entire model and specific tissues in it are compared to safety standards. The highest resolution body model leads to an extreme problem with about 1.2 billion unknowns; the absolute parallel efficiency of the power-absorption simulation with this model is shown to be approximately 78% for matrix fill operations, 66% for memory requirement, and 30% for iterative solution on 8192 processes.
Keywords
biological effects of fields; computational electromagnetics; electromagnetic waves; microwave propagation; parallel processing; 3D scattering problem; BIOEM application; adaptive integral method parallelization; anatomical human body model; bioelectromagnetic analysis; computational complexity; iterative solution; matrix fill operation; memory requirement; petascale supercomputing cluster; power absorption; safety standard; Algorithm design and analysis; Benchmark testing; Biological system modeling; Computational modeling; Design automation; Memory management; Solid modeling; Bioelectromagnetics; fast Fourier transform (FFT); integral equations; parallel algorithms; parallel efficiency; visible human project;
fLanguage
English
Journal_Title
Antennas and Propagation, IEEE Transactions on
Publisher
ieee
ISSN
0018-926X
Type
jour
DOI
10.1109/TAP.2013.2291564
Filename
6670038
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