Title :
Mapping average axon diameters under long diffusion time
Author :
Sanguinetti, Gonzalo ; Deriche, Rachid
Author_Institution :
Athena Project-Team, INRIA Sophia Antipolis-Mediterranee, Sophia Antipolis, France
fDate :
April 29 2014-May 2 2014
Abstract :
This work proposes an original method to recover axon diameter distribution (ADD) parameters using nuclear magnetic resonance. White matter (WM) is modelled as a bi-compartmental medium composed of an intra axonal space where the diffusion is restricted and an extra axonal space where diffusion is hindered. Under the assumption of long diffusion time, we provide a novel and efficient model for the component of the signal due to the restricted part. This technique might be interpreted as an interesting simplification of the AxCaliber framework, which leads to a simpler model and an extremely faster acquisition protocol. To test and validate our method, we use the open-source toolkit Camino for computing Monte-Carlo simulations of NMR data and model the WM as 3D cubic environments, formed by parallel cylinders with gamma distributed radii. Promising experimental results illustrate the potential of the proposed method.
Keywords :
Monte Carlo methods; biodiffusion; biomedical MRI; brain; cellular biophysics; medical image processing; neurophysiology; 3D cubic environments; ADD; AxCaliber framework; Monte Carlo simulations; NMR; average axon diameters mapping; gamma distributed radii; intraaxonal space; long diffusion time; nuclear magnetic resonance; open-source toolkit Camino; white matter; Attenuation; Computational modeling; Data models; Magnetic resonance imaging; Monte Carlo methods; Nerve fibers; Nuclear magnetic resonance;
Conference_Titel :
Biomedical Imaging (ISBI), 2014 IEEE 11th International Symposium on
Conference_Location :
Beijing
DOI :
10.1109/ISBI.2014.6867854