DocumentCode
1789749
Title
Apply support vector regression to extract the potential susceptibility genes of chronic obstructive pulmonary disease
Author
Lin Hua ; Hong Xia ; Ping Zhou ; Li An
Author_Institution
Sch. of Biomed. Eng., Capital Med. Univ., Beijing, China
fYear
2014
fDate
14-16 Oct. 2014
Firstpage
787
Lastpage
791
Abstract
Chronic obstructive pulmonary disease (COPD) is a complex disorder classified as the 3rd cause of the death worldwide. So far, we know that this disease is progressive and can not be cured. In recent years, although some genes have been reported to be associated with COPD, the overlapped genetic associations can´t be replicated. Therefore, it is difficult to synthesize and interpret these different findings. To address this issue, we conducted an integrated data analysis by combining network topological properties with support vector regression (SVR) to extract the potential susceptibility genes of COPD. As a result, COPD-related risk genes such as BBS9, ADAM19 and TGFB1 were identified, and these genes were supported by some previous and recent evidences. Our approach can help improve the accuracy in identifying COPD-related risk genes.
Keywords
data analysis; diseases; genetics; medical disorders; regression analysis; support vector machines; ADAM19; BBS9; COPD-related risk genes; SVR; TGFB1; chronic obstructive pulmonary disease; integrated data analysis; network topological properties; overlapped genetic associations; potential susceptibility genes; support vector regression; Correlation; Data mining; Diseases; Feature extraction; Genetics; Kernel; Support vector machines; chronic obstructive pulmonary disease; network; support vector regression; susceptibility genes;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Engineering and Informatics (BMEI), 2014 7th International Conference on
Conference_Location
Dalian
Print_ISBN
978-1-4799-5837-5
Type
conf
DOI
10.1109/BMEI.2014.7002879
Filename
7002879
Link To Document