Title :
Beta process based adaptive learning for immunosignature microarray feature identification
Author :
Malin, Anna ; Kovvali, Narayan ; Papandreou-Suppappola, A. ; Zhang, J.J. ; Johnston, Samuel ; Stafford, Phillip
Author_Institution :
Sch. of Electr., Comput. & Energy Eng., Arizona State Univ., Tempe, AZ, USA
Abstract :
We propose a latent feature model for immunosignature random peptide microarray data using beta process factor analysis to identify relationships between patients and infectious agents. The method uses Bayesian nonparametric adaptive learning techniques that allow for further classification if additional patient data is received, and new relationships between patients and disease states are obtained. In addition to feature discovery, this methodology can also detect biothreat agents on the fly. Using experimental immunosignature microarray data, we demonstrate the identification and classification of underlying relationships between patients with different disease states.
Keywords :
Bayes methods; diseases; feature extraction; lab-on-a-chip; learning (artificial intelligence); multi-agent systems; pattern classification; Bayesian non parametric adaptive learning techniques; beta process based adaptive learning; beta process factor analysis; biothreat agent detection; disease states; feature discovery; immunosignature microarray feature identification; immunosignature random peptide microarray data; latent feature model; patient data classification; patient-infectious agent relationship identification;
Conference_Titel :
Signals, Systems and Computers (ASILOMAR), 2012 Conference Record of the Forty Sixth Asilomar Conference on
Conference_Location :
Pacific Grove, CA
Print_ISBN :
978-1-4673-5050-1
DOI :
10.1109/ACSSC.2012.6489312