Title :
Automated tracking and modeling of microtubule dynamics
Author :
Saban, M. ; Altinok, A. ; Peck, A. ; Kenney, C. ; Feinstein, S. ; Wilson, L. ; Rose, K. ; Manjunath, B.S.
Author_Institution :
Dept. of Electr. & Comput. Eng., California Univ., Santa Barbara, CA
Abstract :
The method of microtubule tracking and dynamics analysis, presented here, improves upon the current means of manual and automated quantification of microtubule behavior. Key contributions are increasing accuracy and data volume, eliminating user bias and providing advanced analysis tools for the discovery of temporal patterns in cellular processes. By tracking the entire length of each resolvable microtubule, as opposed to only the tip, it is possible to boost dynamics studies with positional information that is virtually impossible to collect manually. We demonstrate the method on the analysis of a microtubule dataset, which was manually tracked and analyzed in the study of betaIII-tubulin isoform. Our results show that automated recognition of temporal patterns in cellular processes offers a highly promising potential
Keywords :
biomedical optical imaging; cellular biophysics; medical image processing; molecular biophysics; pattern recognition; proteins; automated microtubule tracking; automated temporal pattern recognition; betaIII-tubulin isoform; cellular processes; microtubule dynamics; Biological system modeling; Biology computing; Cells (biology); Fluorescence; Informatics; Interference constraints; Machine learning; Microscopy; Proteins; Videos;
Conference_Titel :
Biomedical Imaging: Nano to Macro, 2006. 3rd IEEE International Symposium on
Conference_Location :
Arlington, VA
Print_ISBN :
0-7803-9576-X
DOI :
10.1109/ISBI.2006.1625097