• DocumentCode
    1824733
  • Title

    Geometric alignment of 2D gel electrophoresis images using physics-based elastic registration

  • Author

    Wörz, Stefan ; Winz, Marie Luise ; Rohr, Karl

  • Author_Institution
    Dept. Bioinf. & Functional Genomics, Univ. of Heidelberg, Heidelberg
  • fYear
    2008
  • fDate
    14-17 May 2008
  • Firstpage
    1135
  • Lastpage
    1138
  • Abstract
    A key technique for protein analysis is the geometric alignment of 2D gel electrophoresis (2-DE) images. We introduce a new hybrid elastic registration approach for 2-DE images, which is based on an analytic solution of the Navier equation. With this approach cross-effects in elastic deformations can be handled, which is important for the registration of 2-DE images. We have successfully applied our approach to register 2-DE gel images of different levels of complexity and have performed a quantitative evaluation of the results. We have also carried out a comparison with a previous hybrid elastic registration scheme.
  • Keywords
    biochemistry; bioelectric phenomena; electrophoresis; gels; image registration; medical image processing; molecular biophysics; proteins; 2-DE gel images; 2D gel electrophoresis images; Navier equation; elastic deformation; geometric alignment; hybrid elastic registration; physics-based elastic registration; protein analysis; quantitative evaluation; Bioinformatics; Computer vision; Deformable models; Electrokinetics; Genomics; Image analysis; Image registration; Protein engineering; Shape; Spline; Cross-effects; Gaussian elastic body splines; Gel electrophoresis; Hybrid elastic registration;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on
  • Conference_Location
    Paris
  • Print_ISBN
    978-1-4244-2002-5
  • Electronic_ISBN
    978-1-4244-2003-2
  • Type

    conf

  • DOI
    10.1109/ISBI.2008.4541201
  • Filename
    4541201