Title :
Peak modeling for Ion mobility spectrometry measurements
Author :
Kopczynski, Dominik ; Baumbach, Jörg Ingo ; Rahmann, Sven
Author_Institution :
Bioinf. for High-Throughput Technol., Tech. Univ. Dortmund, Dortmund, Germany
Abstract :
Ion mobility spectrometry (IMS), coupled with multicapillary columns (MCCs), is a technology for analyzing the concentration of volatile organic compounds (VOCs) in the air or in exhaled breath. We introduce a new model-based method for peak description and thus for manifold data reduction. Depending on the number of peaks, we reduce the raw data by five orders of magnitude (about 250 000-fold). Each peak is described with seven parameters, which are estimated by an expectation maximization (EM) algorithm that copes well with overlapping peaks. We transform the parameters into robust and interpretable peak descriptors, which are suitable for downstream analysis steps.
Keywords :
capillarity; expectation-maximisation algorithm; ion mobility spectrometers; organic compounds; air exhaled breath; downstream analysis; expectation maximization algorithm; inexhaled breath; interpretable peak descriptors; ion mobility spectrometry; manifold data reduction; model-based method; multicapillary columns; overlapping peaks; peak description; volatile organic compounds; Compounds; Computational modeling; Data models; Gaussian distribution; Shape; Spectroscopy; Standards; EM algorithm; Ion mobility spectrometry (IMS); data reduction; mixture model; parameter estimation; three-parameter inverse Gaussian distribution;
Conference_Titel :
Signal Processing Conference (EUSIPCO), 2012 Proceedings of the 20th European
Conference_Location :
Bucharest
Print_ISBN :
978-1-4673-1068-0