• DocumentCode
    1850751
  • Title

    Crossing-Preserved and Persistent Splicing Systems

  • Author

    Karimi, Fariba ; Sarmin, Nor Haniza ; Heng, Fong Wan

  • Author_Institution
    Dept. of Math., Univ. Teknol. Malaysia, Johor Bahru, Malaysia
  • fYear
    2011
  • fDate
    27-29 Sept. 2011
  • Firstpage
    167
  • Lastpage
    169
  • Abstract
    By the introduction of the notion of splicing system by Head in 1987, a new approach for bio-inspired problems was made. This mathematical model helps to interpret the behavior of restriction enzymes on DNA molecules when they are cut and pasted. The theoretical skeleton of this model was based on formal language theory. Several types of splicing systems have been defined by different mathematicians. One of those is the persistent splicing system in which the property of being crossing of a site is preserved. In this paper, we introduced two new concepts, namely self-closed and crossing-preserved splicing patterns. The connection of these concepts with the persistent splicing systems is investigated. Some examples are provided to illustrate the relations.
  • Keywords
    biology; formal languages; mathematical analysis; DNA molecules; bioinspired problems; enzymes restriction; formal language theory; mathematical model; persistent splicing systems; Biochemistry; Biological system modeling; DNA; Formal languages; Splicing; Sugar; DNA Molecules; Formal Language Theory; Persistent Splicing Systems; Splicing Systems;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bio-Inspired Computing: Theories and Applications (BIC-TA), 2011 Sixth International Conference on
  • Conference_Location
    Penang
  • Print_ISBN
    978-1-4577-1092-6
  • Type

    conf

  • DOI
    10.1109/BIC-TA.2011.23
  • Filename
    6046892