DocumentCode
1850751
Title
Crossing-Preserved and Persistent Splicing Systems
Author
Karimi, Fariba ; Sarmin, Nor Haniza ; Heng, Fong Wan
Author_Institution
Dept. of Math., Univ. Teknol. Malaysia, Johor Bahru, Malaysia
fYear
2011
fDate
27-29 Sept. 2011
Firstpage
167
Lastpage
169
Abstract
By the introduction of the notion of splicing system by Head in 1987, a new approach for bio-inspired problems was made. This mathematical model helps to interpret the behavior of restriction enzymes on DNA molecules when they are cut and pasted. The theoretical skeleton of this model was based on formal language theory. Several types of splicing systems have been defined by different mathematicians. One of those is the persistent splicing system in which the property of being crossing of a site is preserved. In this paper, we introduced two new concepts, namely self-closed and crossing-preserved splicing patterns. The connection of these concepts with the persistent splicing systems is investigated. Some examples are provided to illustrate the relations.
Keywords
biology; formal languages; mathematical analysis; DNA molecules; bioinspired problems; enzymes restriction; formal language theory; mathematical model; persistent splicing systems; Biochemistry; Biological system modeling; DNA; Formal languages; Splicing; Sugar; DNA Molecules; Formal Language Theory; Persistent Splicing Systems; Splicing Systems;
fLanguage
English
Publisher
ieee
Conference_Titel
Bio-Inspired Computing: Theories and Applications (BIC-TA), 2011 Sixth International Conference on
Conference_Location
Penang
Print_ISBN
978-1-4577-1092-6
Type
conf
DOI
10.1109/BIC-TA.2011.23
Filename
6046892
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