DocumentCode
188888
Title
Grey-box techniques for the identification of a controlled gene expression model
Author
Parise, Francesca ; Ruess, Jakob ; Lygeros, John
Author_Institution
Autom. Control Lab., ETH Zurich, Zurich, Switzerland
fYear
2014
fDate
24-27 June 2014
Firstpage
1498
Lastpage
1503
Abstract
The aim of this paper is to propose a computationally efficient technique for the identification of stochastic biochemical networks, involving only zero and first order reactions, from distribution measurements of the cell population. The moments of the species in such networks evolve according to an affine system, hence the use of grey-box identification methods is suggested. The performance of existing methods and of a new method, based on the transfer function computation, is compared using as benchmark a standard gene expression model. The developed discussion is of interest for the general grey-box identification problem.
Keywords
biology; cellular biophysics; genetics; grey systems; stochastic processes; transfer functions; affine system; cell population; controlled gene expression model identification; distribution measurements; grey-box identification methods; stochastic biochemical network identification; transfer function computation; Equations; Gene expression; Mathematical model; Noise; Optimization; Transfer functions; Vectors;
fLanguage
English
Publisher
ieee
Conference_Titel
Control Conference (ECC), 2014 European
Conference_Location
Strasbourg
Print_ISBN
978-3-9524269-1-3
Type
conf
DOI
10.1109/ECC.2014.6862244
Filename
6862244
Link To Document