• DocumentCode
    1903405
  • Title

    Partially Observable Gene Regulatory Network Control without a Boundary on Horizon

  • Author

    Erdogdu, U. ; Polat, Faruk ; Alhajj, Reda

  • Author_Institution
    Dept. of Comput. Eng., Middle East Tech. Univ., Ankara, Turkey
  • Volume
    1
  • fYear
    2012
  • fDate
    7-9 Nov. 2012
  • Firstpage
    81
  • Lastpage
    88
  • Abstract
    Gene regulatory networks (GRNs) govern the protein transcription process in the cell and interactions among genes play a vital role in determining the biosynthesis rate of proteins. By using intervention techniques discovered by biological research it is possible to control a GRN, thus promoting or demoting the expression rate of a certain gene. In this work, this control task is studied in a partially observable setting where interventions lack perfect knowledge of the expression level of all genes. Moreover, we formulated the task as a lifelong control problem and developed a more flexible and scalable method than the alternatives described in the literature.
  • Keywords
    biocontrol; cellular biophysics; genetics; proteins; GRN control; biological research; gene expression rate; gene interactions; intervention techniques; lifelong control problem; partially-observable gene regulatory network control; protein biosynthesis rate determination; protein transcription process; Aerospace electronics; DNA; Data mining; Dynamic programming; Gene expression; Heuristic algorithms; Proteins; GRN control; POMDP; gene expression data; gene regulatory network;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Tools with Artificial Intelligence (ICTAI), 2012 IEEE 24th International Conference on
  • Conference_Location
    Athens
  • ISSN
    1082-3409
  • Print_ISBN
    978-1-4799-0227-9
  • Type

    conf

  • DOI
    10.1109/ICTAI.2012.20
  • Filename
    6495032