Title :
Characterization of a Supercluster of SnoRNA Genes from Rice Genome
Author :
Xie, Jun ; Fang, Fang ; Hu, HaiRong ; Xu, Feng ; Wu, Qi
Author_Institution :
Sch. of Life Sci., Fudan Univ., Shanghai
Abstract :
Small nucleolar RNAs (snoRNAs) are mainly involved in rRNA processing and modification, including the maturation of precursor ribosomal RNAs (pre-rRNA), and methylation and pseudouridy nation of rRNA bases. These moleclules are transcripted independly, along with host gene as an intron or as polycistron, reflecting the different pathways for processing of precursor snoRNAs (pre-snoRNAs) into mature snoRNAs. Analysis ofsnoRNA gene organizations and sequences will enable us to explore their evolutions. Previously, we have briefly mentioned a surprisingly larg cluster from rice, consisting of 5 duplictions of a cluster. It provides a good opportunity to reveal the evolution machanism of the snoRNA genes. Here detailed examination were performed and the processs of snoRNA gene loss, insertion and tranfer and cluster duplication are highlighted.
Keywords :
biology computing; cellular biophysics; genetics; molecular biophysics; molecular configurations; SnoRNA genes; cluster duplication; evolution machanism; gene insertion; gene loss; gene tranfer; intron; methylation; polycistron; precursor ribosomal RNA; pseudouridy; rice genome; small nucleolar RNA; Bioinformatics; Biomedical engineering; Biomedical informatics; Fungi; Genetic engineering; Genomics; Insertion loss; Laboratories; RNA; Splicing; cluster; evolution; organization; snoRNA;
Conference_Titel :
BioMedical Engineering and Informatics, 2008. BMEI 2008. International Conference on
Conference_Location :
Sanya
Print_ISBN :
978-0-7695-3118-2
DOI :
10.1109/BMEI.2008.263