Title :
Multilevel thresholding of gel electrophoresis images using firefly algorithm
Author :
Noor, M. H Mohd ; Ahmad, A.R. ; Hussain, Z. ; Ahmad, K.A. ; Ainihayati, A.R.
Author_Institution :
Fac. of Electr. Eng., Univ. Teknol. MARA, Permatang Pauh, Malaysia
Abstract :
Gel electrophoresis (GE) is a process of DNA, RNA and protein molecules separation using electric field applied to a gel matrix. This paper describes the image processing techniques applied on GE image to segment the bands from their background. A few pre-processing steps are applied on the image prior to the segmentation technique for the purpose of removing noise in the image. Multilevel thresholding using Otsu method based on Firefly Algorithm is developed. The experimental results show that the Otsu-FA produced good separation of DNA bands and its background.
Keywords :
DNA; RNA; electrophoresis; gels; image denoising; image segmentation; proteins; DNA; Otsu method; RNA; electric field; firefly algorithm; gel electrophoresis images; image noise removal; image processing; image segment; multilevel thresholding; protein molecules separation; Conferences; Control systems; DNA; Fires; Histograms; Image segmentation; Noise; DNA bands image; Firefly Algorithm (FA); Gel electrophoresis image (GE); Otsu method; multilevel thresholding;
Conference_Titel :
Control System, Computing and Engineering (ICCSCE), 2011 IEEE International Conference on
Conference_Location :
Penang
Print_ISBN :
978-1-4577-1640-9
DOI :
10.1109/ICCSCE.2011.6190488