• DocumentCode
    1989085
  • Title

    Graph Theory Application in Cell Nuleus Segmentation, Tracking and Identification

  • Author

    Zhang, Lelin ; Xiong, Hongkai ; Zhang, Kai ; Zhou, Xiaobo

  • Author_Institution
    Shanghai Jiao Tong Univ., Shanghai
  • fYear
    2007
  • fDate
    14-17 Oct. 2007
  • Firstpage
    226
  • Lastpage
    232
  • Abstract
    A novel cell nucleus tracking approach is raised in this paper, developed from applied graph theory that simultaneously handles major challenges of cells touching, splitting, disappearing and emerging. The key point of our work lies in the graphs with robust structures that constructed from large cells groups. Then the problem of nucleus tracking is simplified to that of vertex matching between graphs generated from successive frames. Single cells are modeled as vertices in the graph and edges are built between neighboring ones, through which cells in large quantities are connected altogether. The algorithm works through a process of graph saturation following vertices with maximal entering belief-propagation flows. Feasibility of our approach is validated by so-called ´Crowds Model´ that explains motional features of multi-cells groups. In processing CT image sources with high cell intensities as well as complex variations in structures, robustness of our approach is confirmed in that both successful tracking rates and segmentation rates are kept above 96%.
  • Keywords
    cellular biophysics; computerised tomography; graph theory; CT image; Crowds Model; belief propagation flows; cell nucleus identification; cell nucleus segmentation; cell nulceus tracking; graph theory; Computational modeling; Computed tomography; Graph theory; Humans; Image analysis; Image segmentation; Information analysis; Microscopy; Robustness; Shape; Graph Theory; Nucleus Tracking; Time-Lapse Microscopy;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
  • Conference_Location
    Boston, MA
  • Print_ISBN
    978-1-4244-1509-0
  • Type

    conf

  • DOI
    10.1109/BIBE.2007.4375569
  • Filename
    4375569