• DocumentCode
    1990042
  • Title

    A Robust Method for Generating Discriminative Gene Clusters

  • Author

    Xu, Min ; Zhang, Louxin ; Zhou, Pei Li Joe

  • Author_Institution
    Univ. of Southern California, Los Angeles
  • fYear
    2007
  • fDate
    14-17 Oct. 2007
  • Firstpage
    538
  • Lastpage
    545
  • Abstract
    Microarray technology is often used to identify the genes that are differentially expressed between two biological conditions. Since microarray datasets contain a small number of samples and a large number of genes, it is not difficult to find small gene subsets which are highly discriminative. However, such identified classifiers tend to have poor generalization properties on the test samples due to overfitting. We propose a novel approach for generating discriminative gene clusters. Our experiments on both simulated and real datasets show that our method can generate a series of robust gene clusters with good classification performance.
  • Keywords
    biology computing; genetics; support vector machines; gene clusters; gene selection; microarray technology; support vector machine; Biological interactions; Biology computing; Business; Computational biology; Design methodology; Mathematics; Mobile computing; Noise robustness; Testing; Voting; classification; clustering; component; gene selection; microarray; support vector machine;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
  • Conference_Location
    Boston, MA
  • Print_ISBN
    978-1-4244-1509-0
  • Type

    conf

  • DOI
    10.1109/BIBE.2007.4375613
  • Filename
    4375613