DocumentCode :
1990080
Title :
Biological Mechanism on a Chip: Modeling and Realization of Growth Hormone Secretion Mechanism
Author :
Shell, John R. ; Wang, Yonglian ; Botros, Nazeih M.
Author_Institution :
Southern Illinois Univ., Carbondale
fYear :
2007
fDate :
14-17 Oct. 2007
Firstpage :
546
Lastpage :
552
Abstract :
In this paper, we present a simulation and hardware realization on a compact electronic chip of a simplified Growth Hormone secretion mechanism. After realization, the chip is a stand-alone electronic device that mimics the mechanism. The chip is a Field Programmable Gate Array (FPGA). The mechanism is developed based on a modified bio-mathematical nonlinear delay differential equations. The model explores the effects of Growth Hormone Releasing Hormone (GHRH), Somatotropin Release-Inhibiting factor (SRIF), and Ghrelin (GHS) on Growth Hormone (GH). A Computer Aided Design (CAD) package that includes a Hardware Description Language (HDL) simulator has been implemented to write and compile the HDL code, test the code, verify the simulation, and synthesize the code into Register Transfer Level (RTL) logic blocks. After Synthesis, the logic blocks are downloaded onto the FPGA. Our results indicate the output of the chip and the mathematical simulation are identical.
Keywords :
CAD; biochemistry; biology computing; field programmable gate arrays; hardware description languages; nonlinear differential equations; FPGA; HDL; bio-mathematical nonlinear delay differential equations; computer aided design; electronic chip; field programmable gate array; ghrelin; growth hormone releasing hormone; hardware description language; mathematical simulation; register transfer level logic blocks; secretion; somatotropin release-inhibiting factor; Biochemistry; Biological information theory; Biological system modeling; Computational modeling; Computer simulation; Delay; Field programmable gate arrays; Fluids and secretions; Hardware design languages; Logic testing; Field Programmable Arrays; Growth Hormone; Hardware Description Language; Simulation;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
Conference_Location :
Boston, MA
Print_ISBN :
978-1-4244-1509-0
Type :
conf
DOI :
10.1109/BIBE.2007.4375614
Filename :
4375614
Link To Document :
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