• DocumentCode
    1992576
  • Title

    Storing Efficiently Bioinformatics Workflows

  • Author

    Kinsy, Michel ; Lacroix, Zoé

  • Author_Institution
    Arizona State Univ., Tempe
  • fYear
    2007
  • fDate
    14-17 Oct. 2007
  • Firstpage
    1328
  • Lastpage
    1332
  • Abstract
    We propose an efficient storage strategy to record bioinformatics workflows. Our approach presents scientists with a flexible design model that distinguishes the scientific aim as a design protocol expressed against an ontology from the implementations (s), scientific workflows composed of bioinformatics services, and their execution. The storage strategy presented in this paper allows efficient access and constitutes the framework for reasoning on scientific protocols and experimental data.
  • Keywords
    biology computing; molecular biophysics; protocols; alternative splicing; bioinformatics; flexible design model; mRNA; ontology; protocol; storage strategy; workflows; Access protocols; Application specific processors; Bioinformatics; Databases; Design optimization; Genomics; Ontologies; Proteins; Software tools; Splicing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
  • Conference_Location
    Boston, MA
  • Print_ISBN
    978-1-4244-1509-0
  • Type

    conf

  • DOI
    10.1109/BIBE.2007.4375741
  • Filename
    4375741