• DocumentCode
    2007520
  • Title

    Incremental Hybrid Approach for Microarray Classification

  • Author

    Wani, M. Arif

  • Author_Institution
    Comput. Sci. Dept., California State Univ. Bakersfield, Bakersfield, CA, USA
  • fYear
    2008
  • fDate
    11-13 Dec. 2008
  • Firstpage
    514
  • Lastpage
    520
  • Abstract
    The work presented in this paper describes an incremental hybrid approach that employs principal component analysis (PCA) and multiple discriminant analysis (MDA) methods for microarray classification. The paper first describes a hybrid approach that incorporates PCA and Fisher linear discriminant analysis (FDA) for microarray classification. This hybrid approach effectively solves the singular scatter matrix problem caused by small training samples. To increase the effective dimension of the projected subspace the use of MDA instead of FDA is explored. To improve the performance of the system the data is projected to several subspaces incrementally. The resulting incremental hybrid system improves the accuracy of classification. The paper discusses a comprehensive evaluation of the hybrid systems. The hybrid systems were tested on a dataset of 62 samples (40 colon tumor and 22 normal colon tissue). The results show that the use of incremental hybrid system increased the accuracy of classification of microarray data which will lead to better diagnosis of cancer and other diseases.
  • Keywords
    cancer; genetics; learning (artificial intelligence); matrix algebra; medical diagnostic computing; pattern classification; principal component analysis; tumours; Fisher linear discriminant analysis; cancer diagnosis; gene expression profile; incremental hybrid approach; machine learning; microarray data classification; multiple discriminant analysis; principal component analysis; singular scatter matrix problem; Algorithm design and analysis; Cancer; Colon; Data analysis; Diseases; Gene expression; Linear discriminant analysis; Machine learning; Machine learning algorithms; Principal component analysis; Hybrid algorithm; Incremental algorithm; Microarray Classification; PCA-MDA algorithm;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Machine Learning and Applications, 2008. ICMLA '08. Seventh International Conference on
  • Conference_Location
    San Diego, CA
  • Print_ISBN
    978-0-7695-3495-4
  • Type

    conf

  • DOI
    10.1109/ICMLA.2008.134
  • Filename
    4725022