• DocumentCode
    2031173
  • Title

    Canalization of the Genotype-Phenotype Map: A Coding Theoretic Perspective

  • Author

    El Gamal, H. ; Toher, E.

  • Author_Institution
    Ohio State Univ., Columbus
  • fYear
    2007
  • fDate
    24-29 June 2007
  • Firstpage
    2661
  • Lastpage
    2665
  • Abstract
    In the evolutionary biology literature, canalization refers to the mechanism by which variability is reduced at the phenotypical level. It was first observed by Waddington in 1942 and has been the focus of recent research interest. Here, we attempt to build a bridge between evolutionary biology and information theory by offering a fresh coding theoretic perspective of canalization. In particular, we focus on evolution in rugged multi-peak fitness landscapes and argue that canalization can efficiently smooth-out the roughness of the landscape, and hence, facilitate easier transitions from lower to higher peaks. Inspired by coding theory, we view the landscape peaks as codewords and allow our population to learn the underlying codebook and decision regions through evolution. Interestingly, our model sheds more light on the interplay between robustness, neutrality, and evolvability. Finally, we support our claims by numerical results generated through Monte-Carlo simulations in polynomial fitness landscapes.
  • Keywords
    Monte Carlo methods; biology; encoding; evolution (biological); signal processing; Monte-Carlo simulation; canalization; codebook; codeword; coding theory; decision region; evolutionary biology; genotype-phenotype map; landscape peaks; polynomial fitness landscape; Bridges; Codes; Evolution (biology); Genetic communication; Genetic mutations; Information theory; Irrigation; Organisms; Proteins; Robustness;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Information Theory, 2007. ISIT 2007. IEEE International Symposium on
  • Conference_Location
    Nice
  • Print_ISBN
    978-1-4244-1397-3
  • Type

    conf

  • DOI
    10.1109/ISIT.2007.4557620
  • Filename
    4557620