Title :
Design of short barcodes for next generation sequencing of DNA and RNA
Author :
Schober, Steffen ; Mir, Katharina ; Neuhaus, K. ; Bossert, Martin
Author_Institution :
Inst. of Commun. Eng., Ulm Univ., Ulm, Germany
Abstract :
We consider the design of short barcodes used for parallel sequencing on platforms where substitution errors dominate. A simple randomized method for the construction of barcodes is presented, leading to barcodes with better error-correction capabilities compared to published ones.
Keywords :
DNA; RNA; biological techniques; biology computing; error correction; molecular biophysics; molecular configurations; sequential decoding; DNA; RNA; error correction capability; next generation sequencing; parallel sequencing; short barcode design; simple randomized method; substitution errors;
Conference_Titel :
Genomic Signal Processing and Statistics, (GENSIPS), 2012 IEEE International Workshop on
Conference_Location :
Washington, DC
Print_ISBN :
978-1-4673-5234-5
DOI :
10.1109/GENSIPS.2012.6507719
